-> GRAPHICAL TOOLS 
| Graphical
Bioinformatics Programs |
|
| CIRDNA (EMBOSS, Pasteur) |
CIRDNA draws circular maps of DNA constructs (EMBOSS). |
| LINDNA (EMBOSS, Pasteur) |
LINDNA draws linear maps of DNA constructs (EMBOSS). |
| pDRAW32 (AcaClone software) |
pDRAW32 is a
downloadable freeware tool for plasmid drawing for Windows,
Mac,
and Linux. - It lets you "clone" fragments of DNA generated by virtual digestion with restriction enzymes and optionally blunted at one or both ends. - You can invert the sequence or rotate it. You can also alter the actual sequence. Sequence may be deleted or inserted. - pDRAW32 can generate virtual agarose gel plots, plotting the generated fragment sizes generated with the selected enzymes and enzyme mixtures. Different agarose gel-percentage, run length (Min bp), and DNA molecular weight markers can be selected. - pDRAW32 displays, prints, and exports graphical plots. Circular DNA may be plotted either circular or linear. - pDRAW32 can generate a XY plot of homology between a given sequence and itself or another sequence. - pDRAW32 allows you to calculate the optimal PCR annealing temperature based on the sequence of a pair of primers. |
| Protein Colourer (EBI) |
Protein Colourer is a tool for colouring amino acid sequences, provided by the EBI. |