Selected Papers

Metscher B. and Müller G.B. 2011.
MicroCT for molecular imaging: Quanitiative Visualization of Complete
Three-Dimensional Distributions of Gene Products in Embryonic Limbs.
Developmental Dynamics 240: 2301-2308.
[pdf]

Müller G.B. 2010.
Epigenetic Innovation.
In: Evolution – The Extended Synthesis (Pigliucci M. and G.B. Müller eds.)
MIT Press: Cambridge.
[pdf]

Pigliucci M. and G.B. Müller G.B. 2010
Elements of an extended evolutionary synthesis.
In: Evolution – The Extended Synthesis (Pigliucci M. and G.B. Müller eds.)
MIT Press: Cambridge.
[pdf]

Newman S.A. and G.B. Müller G.B. 2010
Morphological evolution: Epigenetic mechanisms.
In: Encyclopedia of Life Sciences, Wiley: Chichester
www.els.net.
[pdf]

Reiss J.O., A.C. Burke, C.W. Archer, M. De Renzi, H. Dopazo, A. Etxeberría, E.A. Gale, J.R. Hinchliffe, L.N. de la Rosa Garcia, C. Rose, D. Rasskin-Gutman, and G.B. Müller G.B. 2009.
Pere Alberch: Originator of EvoDevo.
Biological Theory 3(4):351-356.
[pdf]

Müller G.B. 2008.
EvoDevo as a discipline.
In: Evolving Pathways: Key Themes in Evolutionary Developmental Biology.
(Minelli A. and G. Fusco eds.), pp 3-29.
Cambridge University Press, Cambridge.
[pdf]

Meng S., L. da F. Costa, S.H. Geyer, M.P. Viana, C. Reiter, G.B. Müller, W.J. Weninger. 2008.
3D description and mathematical characterization of the parasellar internal carotid artery in human infants.
J. Anat. 212: 636-644.
[pdf]

Müller G. B. 2007.
Evo-devo: extending the evolutionary synthesis.
Nature Reviews Genetics, published online 6 Nov 2007.
[pdf]

Callebaut W., G.B. Müller, and S.A. Newman. 2007.
The organismic systems approach: EvoDevo and the streamlining of the naturalistic agenda.
In: Integrating Evolution and Development. From Theory to Practice.
(Sansom R. and B. Brandon eds.), pp 25-92.
MIT Press, Cambridge.
[pdf]

Collins J.P., S. Gilbert, M.D. Laubichler, and G.B. Müller. 2007.
Modeling in EvoDevo: How to integrate development, evolution, and ecology.
In: Modeling Biology
(Laubichler M.D. and G.B. Müller (eds.): pp 355-378.
MIT Press, Cambridge.

Laubichler M. and G.B. Müller. 2007.
Models in theoretical biology.
In: Modeling Biology.
Laubichler M.D. and G.B. Müller (eds.): pp 3-10.
MIT Press, Cambridge.
[pdf]

Müller G.B. 2007.
Six memos for EvoDevo.
In: From Embryology to EvoDevo: A History of Developmental Evolution.
Laubichler M.D. and J. Maienschein (eds.): pp 499-524.
MIT Press, Cambridge MA.
[pdf]

Weninger, J.W., S.H. Geyer, T.J. Mohun, D. Rasskin-Gutman, T. Matsui, I Ribeiro, L. da F. Costa, J.C. Izpisúa Belmonte, G.B. Müller 2006.
High-resolution episcopic microscopy: A rapid technique for detailed 3D analysis of gene activity in the context of tissue architecture and morphology.
Anatomy and Embryology 211(3): 213-221.
[pdf]

Newman S.A. and G.B. Müller. 2006.
Genes and form: Inherency in the evolution of developmental mechanisms.
In: Genes in Development. Re-reading the Molecular Paradigm.
E.M. Neumann-Held and C. Rehmann-Sutter (eds.): pp 38-73.
Duke University Press, Durham.
[pdf]

Newman S.A., G. Forgacs, and G.B. Müller. 2006.
Before programs: The physical origination of multicellular forms.
International Journal of Developmental Biology 50: 289-299.
[pdf]

Costa L. da F., B.A.N. Travençolo, A. Azeredo, M.E. Beletti, G.B. Müller, D. Rasskin-Gutman, G. Sternik, M. Ibañes, and J.C. Izpisúa Belmonte. 2005.
Field approach to three-dimensional gene expression pattern characterization.
Applied Physics Letters 86: 143901-143903.
[pdf]

Müller G.B. 2005.
Evolutionary developmental biology.
In: Handbook of Evolution. Vol. 2.
F. Wuketits and F.J. Ayala (eds.): pp 87-115.
Wiley, Weinheim.
[pdf]

Müller G.B. and S.A. Newman. 2005.
The innovation triad: An EvoDevo agenda.
Journal of Experimental Zoology / MDE 304: 487-503.
[pdf]

Newman S.A. and G.B. Müller. 2005.
Origination and innovation in the vertebrate limb skeleton: An epigenetic perspective.
Journal of Experimental Zoology / MDE 304: 593-609.
[pdf]

Bravo, A.M., A.D. Buscalioni, L. Merino, and G.B. Müller. 2004.
Experimental taphonomy in avian eggs and eggshells: Effects on early diagenesis.
Palaeovertebrata 32(2-4): 77-95.

Costa, L. da F., M.S. Barbosa, E.T.M. Manoel, J. Streicher, and G.B. Müller. 2004.
Mathematical characterization of three-dimensional gene expression patterns.
Bioinformatics 20: 1653-1662.
[pdf]

Streicher J. and G.B. Müller. 2003.
GeneEmac: Three-dimensional visualization of gene expression.
In: Analyzing Gene Expression.
S. Lorkowski and P. Cullen (eds.): pp 811-819.
Wiley-VCH, Weinheim.
[pdf]

Prossinger H., H. Seidler, L. Wicke, D. Weaver, W. Reicheis, C. Stringer, and G.B. Müller. 2003.
Electronic removal of encrustations inside the Steinheim cranium reveals paranasal sinus features and deformations, and provides a revised endocranial volume estimate.
Anatomical Record 273B: 132-142.
[pdf]

Müller G.B. and G.P. Wagner. 2003.
Innovation.
In: Keywords and Concepts in Evolutionary Developmental Biology.
B.K. Hall and W. Olson (eds.): pp 218-227.
University Press, Cambridge.

Müller G.B. and L. Olsson. 2003.
Epigenesis and Epigenetics.
In: Keywords and Concepts in Evolutionary Developmental Biology.
B.K. Hall and W. Olson (eds.): pp 114-123.
Harvard University Press, Cambridge.
[pdf]

Müller G.B. 2003.
Homology: The evolution of morphological organization.
In: Origination of Organismal Form.
G.B. Müller and S.A. Newman (eds.): pp 51-69.
MIT Press, Boston.
[pdf]

Müller G.B. and S.A. Newman. 2003.
Origination of organismal form: The forgotten cause in evolutionary theory.
In: Origination of Organismal Form.
G.B. Müller and S.A. Newman (eds.): pp 3-10.
MIT Press, Boston.
[pdf]

Müller G.B. 2003.
Embryonic motility: Environmental influences and evolutionary innovation.
Evolution and Development 5(1): 56-60.
[pdf]

Wagner G.P. and G.B. Müller. 2002.
Evolutionary innovations overcome ancestral constraints: A re-examination of character evolution in male sepsid flies (Diptera: Sepsidae).
Evolution and Development 4(1): 1-6; discussion 7-8.
[pdf]

Müller G.B. 2002.
Novelty and key innovation.
In: Encyclopedia of Evolution.
M. Pagel (ed.): pp 827-830.
Oxford University Press, Oxford.
[pdf]

Müller G.B. 2002.
Vestigial organs and structures.
In: Encyclopedia of Evolution.
M. Pagel (ed.): pp 1131-1133.
Oxford University Press, Oxford.
[pdf]

Manoel E.T., L. Da Fontura Costa, J. Streicher, and G.B. Müller. 2002.
Multiscale fractal characterization of three-dimensional gene expression data.
In: Computer Graphics and Image Processing.
L.M. Goncalves and S. Raupp Musse (eds.): pp 269-274.
IEEE, Los Alamitos.
[pdf]

Wu K.C., J. Streicher, M.L. Lee, B.K. Hall, and G.B. Müller. 2001.
Role of motility in embryonic development I: Embryo movements and amnion contractions in the chick and the influence of illumination.
Journal of Experimental Zoology 291(2): 186-94.
[pdf]

Streicher J. and G.B. Müller. 2001.
3D modelling of gene expression patterns.
Trends in Biotechnology 19(4): 145-8.
[pdf]

Newman S.A. and G.B. Müller. 2001.
Epigenetic mechanisms of character origination.
In: The Character Concept in Evolutionary Biology.
G.P. Wagner (ed.): pp 559-579.
Academic Press, San Diego.

Müller G.B. 2001.
Homologie und Analogie: Die vergleichende Methode in Morphologie und Ethologie.
In: Konrad Lorenz und seine verhaltensbiologischen Konzepte aus heutiger Sicht. K. Kotrschal, G.B. Müller and H. Winkler (eds.): pp 127-137.
Filander Verlag, Fürth.
[pdf]

Streicher J., M.A. Donat, B. Strauss, R. Sporle, K. Schughart, and G.B. Müller. 2000.
Computer-based three-dimensional visualization of developmental gene expression.
Nature Genetics 25(2): 147-52.
[pdf]

Newman S.A. and G.B. Müller. 2000.
Epigenetic mechanisms of character origination.
Journal of Experimental Zoology 288(4): 304-17.
[pdf]